What would be the future scenario w/ #SARS2 variants?

1. Displacement of Delta by Omicron
2. Long-term co-circulation
3. Omicron wave followed by resurgence of Delta & extinction of Omicron
4-Alternate outbreaks of Omicron & Delta
5-An entirely new VOC may displace the two 1/
We know an Omicron infection protects well against reinfection by Delta in previously vaccinated people, but not so well in those that have not been previously vaccinated. In unvaccinated people an Omicron infection only protects well against Omicron reinfection. 2/
This gives advantage Omicron in a highly vaxxed world. But epidemiology of the two VOC in coming weeks should tell us how efficiently Omicron is displacing Delta 3/
But according to @TWenseleers it's more likely we would see some degree of co-existence & the alternating wave dynamics we see with influenza B. Possibly complemented by additional immune escape variants. 4/
BA.2 might displace BA.1 though, as that would probably represent more subtle antigenic drift - closer to what we see in influenza A/H3N2. 5/
As per @trvrb the more immune escape Omicron has from Delta-specific immunity the more the two variants have distinct ecological niches & so are able to co-exist without stepping on each other's toes 6/
@trvrb also envisages three distinct scenarios 7/
@trvrb “Co-circulation occurs when Ro is similar between Omicron and Delta and/or when there is little cross-immunity, and displacement occurs when there is strong cross-immunity and lopsided Ro”. 8/
If Omicron and Delta co-circulate then annual vaccines would be best formulated as multiple valencies (just like flu vaccine has both B/Victoria and B/Yamagata) and we can expect generally higher levels of viral circulation than in the displacement scenario. 9/
@trvrb believes that we'll see displacement, but we should have first hint at outcome in the next few weeks as we see to what degree the Omicron wave reduces Delta circulation in the US & Europe. 10/
Epidemiologist @adamjkucharski also believes the same. He cites the example of seasonal coronavirus OC43, there's a split into two co-circulating lineages 11/
So, some degree of coexistence & alternating waves with each of the types predominant might be getting more and more likely concludes @TWenseleers 12/

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More from @vipintukur

Jan 19,
📌 A must-read article, the missing link?

What we know so far?

1-The dysregulation of innate and adaptive immunity has been recognized to play a critical role in the clinical outcome of COVID-19 patients. 1/
2-Severe evolution of COVID is thought to be driven by hyperactivated innate immunity in addition to adaptive immune defects resulting in lymphopenia & neutrophils/lymphocytes imbalance

3-A deficient IFN response has also been shown to favor or result from SARS2 infection 2/
These immunological dysregulations are thus underlying hyper-immune reactions such as the “cytokine storm” syndrome, MIS-C, dysregulation of coagulation, as well as neurological & various other manifestations 3/
Read 25 tweets
Jan 19,
A new study from #Thailand

#COVID19 breakthrough infection after #CoronaVac inactivated vaccine induced robust antibody responses & cross-neutralization of #SARS2 variants, but less immunity against #Omicron

1/
Binding antibody levels in sera from patients with breakthrough infection (BI) were significantly higher than those in individuals who had received AstraZeneca Vaccine as a third vaccination. 2:
However, neutralizing activities against wild-type and variants including Alpha, Beta, & Delta were comparable in patients with BI & individuals who received a 3rd vaccination with AZ vax, which activities are exceeding 90%. 3/ Image
Read 4 tweets
Jan 19,
A new modelling study on the value of vaccine boosters to mitigate the global impact of #Omicron

By fitting an immunological model to population-level vaccine effectiveness (VE) data, NAb titres for Omicron are reduced by 3.9 fold compared to the Delta variant 1/
Under this model, it is predicted that 90 days after boosting with the Pfizer-BioNTech vaccine, efficacy against severe disease (admission to hospital) declines to 95.9% against the Delta & 78.8% against the Omicron 2/
Integrating this immunological model within a model of SARS2 transmission, the size of the Omicron wave will depend on the degree of past exposure to infection across the population, w/ relatively small Omicron waves in countries that previously experienced a large Delta wave 3/
Read 7 tweets
Jan 19,
The current narrative is, “Covid vaccines prevent severe disease & deaths.”This is going back on the stated primary endpoint “prevention of symptomatic disease.”
Why is it important to avoid symptomatic disease even during the #Omicron surge? 1/

Even infection is worrisome: may damage/destroy T cells! According to T cells expert @fitterhappierAJ “CD95-mediated [T cell] differentiation & death may be advancing T cells to greater effector acquisition, fewer numbers, & immune dysregulation.” 2/

frontiersin.org/articles/10.33… Image
T cells are decreased and exhausted in patients with COVID-19. Cytokines such as IL-10, IL-6, and TNF-α might be involved in T cell reduction. 3/

frontiersin.org/articles/10.33… Image
Read 6 tweets
Jan 18,
Delta & Omicron strains are the most globally relevant VOCs. While individuals infected with Delta are at risk to develop severe lung disease, Omicron infection causes less severe disease, mostly URT symptoms. 1/
The question arises whether rampant spread of #Omicron could lead to mass immunization, accelerating the end of the pandemic. 2/
A new study shows that infection with Delta, but not Omicron, induces broad immunity in mice. While sera from Omicron-infected mice only neutralize Omicron, sera from Delta-infected mice are broadly effective against Delta and other VOCs, including Omicron. 3/ Image
Read 20 tweets
Jan 18,
The current events have ‘forced’ me to do a quick, random analysis of global Covid Vaccination (may not be perfect). A short thread….👇 1/
1-Covid vaccines are not providing good protection against infection including ‘symptomatic disease’: the primary endpoint of their efficacy trials

2-They failed to provide reasonable durability of immune response, more so ag the last two global VOC. 2/
3-Though high NAb titers are no guarantee for protection against infection, for a highly immune evading variant like Omicron, one needs several folds(>30-40 folds) higher titers than other variants for protection
Read 14 tweets

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