Mia Malan Profile picture
Feb 8, 2022 15 tweets 10 min read Read on X
[Thread] 1. Why are #Omicron infections in SA decreasing slower than what they increased?
@Dr_Groome of @nicd_sa:
1. 4th wave’s downward slope = plateaued. We’ve had similar nrs of new #COVID19 cases for 3 weeks
2. 4th wave downward slope (graph) = not as steep as upward slope
2. Is the number of #COVID19 infections per 100 000 people increasing in any province?

1. Yes, it's increasing in MP, FS, GP, LP (if we compare the past 7 days with the previous 7 days)
2. In coastal provinces (WC, KZN, EC) cases are decreasing
3. Is the % of #COVID19 tests coming out positive (test positivity rate) increasing in any province?

1. Yes, over the past 3 weeks the test + rate has increased in GP, FS, MP, LP (black line on graph)
2. But the test + rate declined in coastal provinces (WC, EC, KZN) and NC.
4. In which age groups are increases in new #COVID19 cases and the % of people testing positive occurring?

Mainly in those younger than 20 years
5. So why are the increases in some provinces happening and why are new #COVID19 cases not going down?
Possible reasons:
1. There’s a new variant or lineage of #Omicron circulating
2. There are changes in behaviour or exposure, e.g. the opening of schools
6. Is there a new #COVID19 variant?

1. Not an entirely new variant, but an #Omicron subvariant that has been identified in about 60 countries
2. It has been circulating in SA for 2 months. It’s called BA.2 or 21L (the original Omicron lineage = called BA.1)
7. If BA.2/21L has been around in SA for 2 months, why are we only concerned about it now? Because it's occurrence is increasing.

1. 99.1% of #COVID19 cases in SA are caused by #Omicron
2. In Dec, 4% of tests analysed = BA.2/21L
3. In Jan, 23% of tests analysed = BA.2/21L
8. Why could BA.2/21L potentially be contributing 2 more #COVID19 infections?

Data from Denmark + UK suggest = more transmissible than #Omicron BA.1 (original form), so it spreads faster + infects more people. No indication that it makes people sicker: bit.ly/3Lupqlx
9. Should we be worried?
@Dr_Groome:

We don’t yet have enough data to be concerned, but SA is monitoring the spread of BA.2 and is now collecting larger numbers of test samples to analyse in provinces where infections are increasing (so in MP, GP, LP, FS, NW)
10. Why are we specifically seeing upticks in infections in people younger than 19?

@Dr_Groome:
1. Schools have opened
2. Why do we see increases in northern provinces but not coastal provinces? Schools in coastal provinces opened later, so increases = likely in the next weeks
11. Why could the opening of schools have led to more #COVID19 infections?
1. More people = gathered indoors (it increases the risk 4 infection)
2. Fewer young people than older people = vaxxed/previously infected (so they have lower levels of immunity)
12. @Dr_Groome:

1. Increases in school kids = not unexpected (schools were closed for most of the 4th wave and now opened - we saw a similar picture during the 3rd wave)
2. We need to encourage vaccination in people between 12 and 17 years of age
13. What’s happening with hospital admissions?

Past 2 weeks:
1. On a provincial level, hospitalisations = declining
2. On a district level, there are increases in 15 districts, eg. City of Tshwane (where SA's #Omicron outbreak started)
14. Who is getting admitted to hospital?
Waasila Jassat, @nicd_sa:

1. Mainly people of younger than 30, particularly school-going children (so it corresponds to the higher nr of current infections in that group)
2. Mainly unvaccinated people
15. How does SA’s #COVID19 deaths in vaxxed vs. unvaxxed people compare 2 the US where the vaxxed pop = larger than the unvaxxed pop (SA = the opposite)?

@ProfAbdoolKarim:
CDC analysis:
Death rate in US = 13-fold higher in unvaxxed people vs. those with 2 vax doses

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More from @miamalan

Jan 17
[Thread] 12 things to know about the the proportion of pregnant women infected with #HIV from SA’s latest antenatal HIV survey. The survey is conducted by the @nicd_sa.

(Analysis of our 95-95-95 goals in my next thread later in Jan).

1/12 Image
2. What is the antenatal #HIV survey?

1. It measures the % of HIV+ pregnant women between the ages of 15 + 49.
2. Only women using state pregnancy clinics take part.
3. The survey has been conducted each year between 1990-2015, then in 2017, 2019 +2022. Image
3. How many pregnant women between 15-49’s blood was tested for #HIV? 37 828 out of 40 542 collected samples.
- 37 7171 = Black African women
- 37 541 didn’t live with the dad of their child
- 35,635 of dads were 5 years+ older than moms (this makes them more likely to get HIV) Image
Read 12 tweets
Jan 10, 2023
JUST IN [Thread]:
1.@healthza's Lesley Broomberg:
An extra #COVID19 booster jab for people of 18+ in SA will become available towards the end of JANUARY
- People of 50+ qualify for a 5th dose
- People of 18+ qualify for a 4th dose
2. Lesley Broomberg: Can you mix and match with additional boosters? Yes. You can choose whether you want a #JnJ or #Pfizer booster.
3. Lesley Broomberg:
Will teens of 12-17 qualify for boosters? Not at this stage. Why not? The #VMAC = not recommended booster doses for 12-17, based on an understanding that the protection provided by 2 #Pfizer doses = adequate, as 12-17 = @ low risk of severe #COVID19 illness
Read 5 tweets
Jan 10, 2023
[Thread] #JoePhaahla:
- Genomic surveillance Network reported the detection of the new subvariant XBB.1.5 in SA of a sample of a patient tested on 22 Dec
- Details of the patient = not known, it was a random sample taken for testing
- XBB.1.5 = also common in US
2. XBB.1.5 = common in US
#JoePhaahla:
- 97%+ of #COVID19 cases worldwide = still #Omicron
- XBB.1.5 cases = no major change in hospitalisations or deaths
- Immunity of SAs (vax and natural immunity) = still strong, so that is why we haven't seen much change in terms of hospital admissions/deaths
Read 5 tweets
Dec 13, 2022
🧵1. SA's @aspenpharma will be making 4 jabs (fill + finish) — pneumococcal, rotavirus, meningococcal, hexavalent — from 2023.

How will they finance this?
With a $30 million grant from @CEPIvaccines + @gatesfoundation.

Which APIs will Aspen use?
India's Serum Institute's
2. Why is it NB that an African company makes these jabs?

#Africa imports almost all its jabs. #COVID19 showed us this results in Africa being last in line to get vaccines during pandemics. The grant to Aspen is 1 of the 1st steps to change that.
3. What's the goal?

By 2040, the African Union wants #Africa to make 60% of the jabs the continent uses.

Why?
So that Africa is better equipped 2 respond 2 outbreaks (by developing the ability to make jabs + have technology in place to also make new jabs during pandemics).
Read 6 tweets
Dec 2, 2022
🧵1. BREAKING: @SAHPRA1 has confirmed the registration of the #HIV prevention jab, #CABLA in South Africa. On Thursday, #ViiVHealthcare issued their statement. ImageImage
2. Who can use the jab? @SAHPRA1 didn't specify restrictions for use in their statement, only that it is "a highly effective option for people at substantial risk of #HIV infection." Image
3. How does the jab work? It uses an #ARV called cabotegravir that prevents #HIV from replicating and entering someone’s cells. It’s taken every two months. Read my latest story for more. bit.ly/3ER7ejq
Read 5 tweets
Dec 1, 2022
🧵1. @SAHPRA1 says it’s “days away” from announcing a decision on the registration of the #HIV prevention jab, #CABLA. The shot virtually wipes out your chances of contracting HIV through sex + needs to be taken every 2 months. bit.ly/3ER7ejq#WAD2022
2. How does the jab work? A bit like contraception, says @LindaGailBekker. “U take contraception before sex 2 prevent pregnancy. Similarly, u take the jab before being exposed 2 #HIV 2 prevent infection.” Listen 2 Linda-Gail on @bhekisisa’s #HealthBeat. bit.ly/3FjBlS8
3. What makes #CABLA work? An antiretroviral drug called cabotegravir. Some people with #HIV use it for treatment, along with other #ARVs. The drug prevents #HIV from entering your cells. bit.ly/3ER7ejq
Read 8 tweets

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