📍Scientists have discovered a new canine coronavirus in a child who was hospitalized with pneumonia in 2018. If confirmed to be a human pathogen, it’d only be the world’s 8th coronavirus, and the first canine coronavirus, known to cause disease in humans.
nytimes.com/2021/05/20/hea…
2) It is not yet clear whether this specific virus poses a serious threat to humans, the researchers stress. The study does not prove that the pneumonia was caused by the virus, which may not be capable of spreading between people.
3) But the finding, which was published on Thursday in the journal Clinical Infectious Diseases, highlights the need to more proactively search for viruses that could jump from animals into humans, the scientists said.
4) “I think the key message here is that these things are probably happening all over the world, where people come in contact with animals, especially intense contact, and we’re not picking them up,” said Dr. Gregory Gray, an epidemiologist at Duke University & a study author.
5) “We should be looking for these things. If we can catch them early and find out that these viruses are successful in the human host, then we can mitigate them before they become a pandemic virus.”
6) Seven coronaviruses are currently known to infect humans. In addition to SARS-CoV-2, which is the virus that causes Covid-19, there are coronaviruses that cause SARS, MERS and the common cold.
7) Many of these viruses are believed to have originated in bats, but can jump from bats to humans, either directly or after a stopover in another animal host.

…until now there has been no evidence that canine coronaviruses can infect people.
8) Scientists still cannot be certain whether it was a dog that transmitted the new virus to the patient; it likely was a dog, Dr. Gray said, but another, intermediate animal host, including a cat, may have been responsible.
9) (There is also no evidence that dogs transmit SARS-CoV-2 to humans, although both cats and dogs can catch it.) nytimes.com/2020/09/29/sci…
10) In eight of the specimens, they detected what seemed like a novel coronavirus, similar to those known to infect dogs. These specimens were primarily from children who lived in settings or areas in which contact with domestic and wild animals was common.
11) At first, Dr. Gray said, he and his colleagues thought that they had made a mistake. “If we examine 300 patients and eight of them show a canine coronavirus that had never been seen before, you go, ‘This must be a contaminant, this must be — this can’t be true,’” he said.
12) she confirmed that two of the eight samples did appear to contain a novel canine coronavirus. Moreover, one of those samples proved capable of causing damage to canine cells, she found.
Then she assembled the complete genome of the virus from this sample.
13) Its genome closely matched that of other known canine coronaviruses. “It is highly similar to a number of previously characterized canine coronaviruses, but it’s a novel strain,” Dr. Vlasova said.
14) The virus seemed to be a combination of two previously identified canine coronaviruses, and also contained fragments of both a cat coronavirus and a pig coronavirus.

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More from @DrEricDing

23 May
⚠️PAY ATTENTION to rising #B16172 crisis in UK—crucial because India variant affects us all. It is now ~50% of all cases in England, surging fast, especially in kids. Hospital #COVID19 ward in Bolton🇬🇧 filling up. “It’s too late to contain” @chrischirp 🧵
assets.publishing.service.gov.uk/government/upl… ImageImage
2) And key worry is that the surge in #B16172 is domestic community transmission. Not related to international travel. Image
3) And look at the growth rate! #B16172 variant is by leaps and bounds growing faster than any other variant. The previously fast #B117 is growing much much slower—5x slower than B16172.

There can be 2 reasons—higher transmissibility, or more reinfection / vaccine breakthroughs. Image
Read 10 tweets
23 May
It’s sickening to watch UK’s CDC equivalent (Public Health England) now being an outlet of Boris Johnson administration’s propaganda. Yesterday, Johnson’s office censored PHE from publishing #B16172 outbreak data in schools—and then hails 33-60% 1&2 dose efficacy as a win for AZ.
2) to be clear, while 60% 2-dose efficacy is good, it’s not great. And asymptomatic infection likely lower. And 33% 1 dose is tricky too given how many countries rely on one dose strategy.
3) Many scientists are shocked by the recent actions of PHE to muzzle and coverup school outbreak data on #b16172.
Read 4 tweets
23 May
NEW—UK reports that 2 doses of AstraZeneca vaccine efficacy for #B16172 India variant: just 60%. And latest study says #B117 efficacy just 66% (lower than before). 1-dose efficacy 33% for #B16172.

Clearly #B16172 problematic in 🇬🇧 when 2/3 of shots is AZ
gov.uk/government/new… Image
2) that said, the Pfizer-BioNTech vaccine was 88% effective against symptomatic disease from the B.1.617.2 variant 2 weeks after the second dose, compared to 93% effectiveness against the B.1.1.7 variant
3) “both vaccines were 33% effective against symptomatic disease from B.1.617.2, 3 weeks after the first dose compared to around 50% effectiveness against the B.1.1.7 variant”
Read 9 tweets
23 May
Staggering—at least 3 million excess deaths in 2020–which is **1.2 mil** more than the 1.8 mil official numbers: WHO estimates that is the excess in the America & Europe alone (data not yet including Asia, Africa, Middle East).

I’m also imagining India 😢
who.int/data/stories/t… ImageImage
2) “Excess mortality is defined as the difference in the total number of deaths in a crisis compared to those expected under normal conditions. COVID-19 excess mortality accounts for both the total number of deaths directly attributed to the virus as well as the indirect impact”
3) what about undercount? “A recent assessment of health information systems capacity in 133 countries found that the percentage of registered deaths ranged from 98% in the European region to only 10% in the African region.” Damn! who.int/data/data-coll…
Read 7 tweets
22 May
Muzzling risks in schools—Downing Street (Boris Johnson) censored @PHE_uk and prevented crucial data on spread of new #COVID19 variant in schools—notably blocking data on Indian variant school spread. Scientists & teachers said it was “deeply worrying”. 🧵
theguardian.com/world/2021/may…
2) “The focus of their anger concerns the pre-print of a PHE report that included a page of data on the spread of the India Covid-19 variant in schools. But when the report was published on Thursday 13 May, the page had been removed.”
3) “It was the only one that had been removed from the pre-print. Days later, the government went ahead with its decision to remove the mandate on face coverings in English schools.”
Read 11 tweets
22 May
TWO DOSES NEEDED—New UK vaccine data finds 1-shot protection for symptomatic infection of #B117 variant is 51%, and just 33% versus #B16172 from India. However, after 2 doses—87% for #B117 & 81% for #B16172. But mixed 3 vaccine types—unclear AZ vs mRNA. 🧵
ft.com/content/a70d42… Image
2) “This suggests a single shot offers 35 per cent less protection against B.1.617.2 compared with B.1.1.7, according to Financial Times analysis.
The PHE figures aggregate data from the BioNTech/Pfizer and Oxford/AstraZeneca jabs.”
3) “The rapid spread of B.1.617.2 in pockets of England has cast doubt on the country’s road map out of lockdown, with the next phase due to take place on June 21. “PHE scientists are evaluating the effectiveness of vaccines against B.1.617.2 variant” & will publish data later.
Read 8 tweets

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