✨CoVariants.org is updated with new data, & a new 21K #Omicron build is up as well.✨
I won't continue tweeting every time there's an update - I'm currently trying to update both daily, as much as possible. Just keep checking back!
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I won't continue tweeting every time there's an update - I'm currently trying to update both daily, as much as possible. Just keep checking back!
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We can now start to see a hint of Omicron appearing in recent sequencing from countries with recent imported cases, with Netherlands as an example below. (#Omicron is in purple, top right)
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In the focal build, we can see more #Omicron sequences coming in from more countries, thanks to hard work by labs worldwide, & #opendata.
These builds lag behind the latest data in GISAID, so countries may take 1-2 days to appear!
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These builds lag behind the latest data in GISAID, so countries may take 1-2 days to appear!
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You can check when CoVariants.org was last updated by looking at date at the top right (1st picture). The data is usually from day before.
You can see when Nextstrain builds are updated at the bottom of the page (2nd picture). This is when data was downloaded.
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You can see when Nextstrain builds are updated at the bottom of the page (2nd picture). This is when data was downloaded.
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CoVariants.org is updated with a new link & reference to the S:484 mutation, clarification of the deletions around S:211 & S:142-144, & addition of a missing mutation. Thanks to many, including Richard T(via Email) & @Jeppinger for suggestions & catches!
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