As a result of the emergence and circulation of antigenically distinct #SARS2 variants, a number of variant-modified #COVID19 vaccines have been developed. 1/
The researchers performed a meta-analysis of the available data on neutralisation titres from clinical studies comparing booster vaccination with either the current ancestral-based vaccines or variant-modified vaccines. 2/ Image
They then use this to predict the relative efficacies of these booster vaccines under different scenarios.

Here are the key findings of this modelling study:

1-A large proportion of the benefit comes from receiving any booster at all (including an ancestral-based booster) 3/
2-Use of a variant-modified vaccine is expected to provide a modest increase in protection, which may be slightly greater in cases where the vaccine immunogen is more antigenically related to the circulating variant or if immunity has waned. 4/ ImageImage
3-However, even if the SARS2 variant circulating at the time of vaccination is relatively antigenically distant from immunogen in the variant-modified booster, an elevated level of protection (when compared to either no booster or an ancestral-based booster) is still expected 5/
4-The overall benefit of variant-modified vaccines will likely be determined by other factors, including the time since vaccination (waning of immunity), relative availability, cost & community acceptance of these vaccines over existing vaccines 6/

medrxiv.org/content/10.110…

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More from @vipintukur

Aug 29
For SARS2, there are 4 main goals of vaccination:

1-Protection from infection;
2-Prevention of transmission;
3-Protection from severe disease; and
4-Prevention of Long Covid.

If we do a dispassionate analysis, only the third objective has been accomplished so far! 1/
When vaccines were initially rolled out, the early high NAb titers following immunization led to hopes that the vaccines would largely block infection and transmission. 2/
However, two issues have emerged that question whether these goals are still achievable with current vaccines.

-The high NAb titers observed at peak immunity several weeks after mRNA vaccination wane rapidly and substantially, often within 4 to 6 months 3/
Read 27 tweets
Aug 26
New data from #Singapore:

➡️ The estimated effectiveness of the mRNA booster (Pfizer-BioNTech BNT162b2 or Moderna mRNA-1273) against Omicron-confirmed infections ranged from 31.7% to 41.3% with rapid waning over time. 1/
Five months and more after boosting, estimated booster effectiveness against confirmed infection waned, ranging from –2.8% to 14.6%. 2/
Estimated mRNA booster effectiveness against severe COVID-19 was 87.4% with no evidence of waning up to 6 months after boosting. 3/
Read 5 tweets
Aug 26
⚠️ Emergence of #XAY & #XAW: the NEW complex recombinants of much feared Delta & BA.2 detected in South Africa!

Should we be worried? What do we know about them so far? 1/

@PeacockFlu
@Tuliodna
A couple of pretty interesting 'complex' recombinants that recently got assigned - XAY and XAW. Both of which are BA.2 x Delta recombinants.

'XAY' contains an immune evasive F486P mutation 2/

Figure by @PeacockFlu Image
XAY found earlier in South Africa has got a very complex pattern of recombination compared to previous recombinants

Both XAY and XAW have a number of additional RBD mutations on top of BA.2 that probably impact antigenicity

3/
Read 4 tweets
Aug 25
#SARS2 can readily alter its Spike protein via a single Amino acid substitution so that it is not recognized by CD8 T cells targeting the most prevalent epitope in Spike restricted by the most common HLA-I across the population. 1/
The Spike #P272L mutation that has arisen in at least 112 different #SARS2 lineages to date, including in lineages classified as “VOC”, was not recognized by the large CD8 T cell 2/
The CD8 T cells response seen across cohorts of HLA A∗02+ convalescent patients & individuals vaccinated against SARS2, despite these responses comprising of over 175 different individual T cell receptors. 3/
Read 8 tweets
Aug 25
This is interesting!

The human face is one of the most visible features of our unique identity as individuals. Interestingly, monozygotic twins share almost identical facial traits & the same DNA sequence but could exhibit differences in other biometrical parameters. 1/
The expansion of the internet & the possibility to exchange pictures of humans across the planet has increased the number of people identified online as virtual twins or doubles that are not family related. 2/
In this study, the researchers characterized in detail a set of “look-alike” humans, defined by facial recognition algorithms, for their multiomics landscape. 3/
Read 6 tweets
Aug 24
In late 2020, the #JCVI of #England made two important recommendations for the initial roll-out of the #COVID19 vaccine.

1-Vaccines should be targeted to the elderly and vulnerable to maximally preventing disease rather than infection 1/
2-To increase the interval between first and second doses of ChAdOx vaccine for 3 to 12-weeks in order to have a higher efficacy with this longer dose interval. 2/
A new modelling study from England shows that targeting the most vulnerable had the biggest immediate impact (compared to targeting younger individuals who may be more responsible for transmission). 3/
Read 4 tweets

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