Thread by @RajlabN

#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

31.05% BA.5.2.1
17.11% BA.5.2
12.23% BA.5.1
9.03% BA.4.6
5.08% BA.5.5
5.03% BA.5.6
4.01% BA.5
2.19% BA.4.1
2.01% BF.5
1.50% BE.1

Tracker: tinyurl.com/mryj4uu7

#OmicronUpdates 09/13/22
1/n

Top circulating lineages:

84.80% BA.5*
12.56% BA.4* [of which 9.03% BA.4.6]
0.94% BA.2.75* 👀
1.7% Others

2/n

Now the spotlight is on #Oregon, #NewHampshire, #Maine & #Maryland!

Week-over-week trend in new confirmed SARSCoV2 positive cases is >60%

Source: charts.medriva.com/us/

3/n

BA.5* group of lineages have outcompeted all other circulating lineages in the USA.

@CDCgov updated variant proportions estimates on 9/13/2022 (updates every Tuesday)

https://twitter.com/RajlabN/status/1569658566771875840

4/n

#NewYork is a BA.4.6 (Spike R346T) hotspot

5/n

Tracking BA.2.75* (#Centaurus) over time in #USA

Closely following BA.2.75.2* (Spike 346T, 486S, 1199N)

more details on BA.2.75.2: github.com/cov-lineages/p…

USA Tracker: public.tableau.com/app/profile/ra…

6/n

#Arizona is a BA.2.75.2* (Spike 346T, 486S, 1199N) hotspot!

public.tableau.com/app/profile/ra…

7/n

Relative Growth Advantages of BA.2.75.2* vs top circulating lineages in USA (over last 3 months) > 100%

early days... in a few weeks this might settle down to around ~50% (a significant advantage over circulating lineages)

8/n

#Hospital #Capacity - (by State/Division)

All hospitalizations not just COVID-19

public.tableau.com/app/profile/ra…

9/n

#COVID19 #Hospitalizations in the #UnitedStates

Please get #boosted (especially > 50 yr old and immune compromised) and #MaskUP!

Hospital Tracker (by States, by age group): public.tableau.com/app/profile/ra…

10/n

Closely watching #Pediatric #COVID19 #Hospitalizations in #USA

#90DayTrends

11/n

#COVID19 #Cases and #Deaths - US States
-@CDCgov data

Tracker: public.tableau.com/app/profile/ra…

12/n

Status of the latest #COVID19 Wave in #NewYork #BellwetherState

Top circulating variants - BA.5.2.1, BA.5.2, BA.5.1, BA.4.6 (~12.3%)

... and 0.79% BA.2.75*

Don't let your guard down!

13/n

Status of the latest #COVID19 Wave in #Arizona

Top circulating variants - BA.5.2.1, BA.4.6 (~14%), BA.5.2, BA.2.75* (~7.7%) 👀

Low sequence counts - closely monitoring cases, hospitalizations!

Please get #Boosted and #MaskUp!

14/n

Oregon (from @nytimes )
Daily New Confirmed Cases (7-day ave) - last week: 492

Daily New Confirmed Cases (7-day ave) - this week: 611 ⬆️