#COVID19 #VariantDashboard - #UnitedStates
Interesting tug of war between BQ.1.1 & XBB.1.5
TOP lineages (#15DAYTRENDS):
27.0% XBB.1.5 👀
14.7% BQ.1.1
8.4% BQ.1
4.1% BQ.1.22
3.9% XBB.1
2.2% BQ.1.1.4
Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 12/31/22
1/n
Sequence count by US State
New York has submitted a lion's share of sequences with specimen collection dates in the last 15 days.
2/n
Granular details -#VariantDashboard #USA #15DayTrends
3/n
.@CDCgov updated variant proportions estimates on 12/30/2022 (updated every Friday)
Several BQ* are circulating at >1% especially BQ.1.22 is a good candidate to be included in CDC's Nowcast estimates next week!
4/n
#Global #VariantSoup 12/31/2022
Top lineages with at least 5 key convergent #Spike mutations (#30DayTrends):
BQ.1.1 (24.45%)
BQ.1 (9.38%)
BQ.1.22 (4.14%)
XBB.1 (4.09%)
CH.1.1 (2.71%)👀
BQ.1.2 (2.29%)
XBB.1.5 (2.26%)👀
BQ.1.1.4 (2.04%)
BN.1.3 (1.81%)
BQ.1.1.20 (1.65%)
5/n
Predicted Immune Escape and ACE2 binding of top lineages in USA (relative to BA.2)
Bivalent boosters (OG/Omicron.BA.5) will potentially protect the boosted from getting severe disease/hospitalizations.
Please get #boosted ASAP!
public.tableau.com/app/profile/ra…
6/n
#Hospital #Capacity - (by State/Division)
All hospitalizations not just COVID-19
public.tableau.com/app/profile/ra…
7/n
#COVID19 #Hospitalizations in the #UnitedStates
Please get #boosted (especially > 50 yr old and immune compromised) and #MaskUP!
Hospital Tracker (by States, by age group): public.tableau.com/app/profile/ra…
8/n
Status of the latest #COVID19 Wave in #NewYork #BellwetherState
XBB.1.5 is the dominant #SARSCoV2 lineage in NY
Top Lineages (#15DAYTrends):
XBB.1.5 (52.5%)👀🚀
BQ.1.1 (10.7%)
XBB.1 (6.5%)
BQ.1 (5.3%)
BQ.1.1.4 (2.6%)
BQ.1.3 (1.6%)
XBB.2 (1.5%)
9/n
Rise of highly immune evasive XBB* family of lineages especially XBB.1.5 (Key mutation: Spike F486P) in NY is concerning
fortune.com/well/2022/11/0…
10/n
BQ* Hotspots - #USA #15DayTrends
11/n
Recombinant lineage hotspots - #USA #15DayTrends
12/n
Tracking the current #COVID19 wave, variant soup and #Hospitalizations in #California
BQ.1.22 👀, BQ.1 and BQ.1.1 are the top circulating lineage in CA
[low sequence count]
13/n
Tracking the current #COVID19 wave, variant soup and #Hospitalizations 👀 in #Massachusetts
XBB.1.5 is the top circulating lineage in MA
[low sequence count]
14/n
more on #Massachusetts's XBB.1.5 wave
bostonglobe.com/2022/12/28/met…
15/n
Tracking the current #COVID19 wave, variant soup and #Hospitalizations 👀 in #Connecticut
XBB.1.5 is the top circulating lineage in CT
16/n
Tracking the current #COVID19 wave, variant soup and #Hospitalizations in #NewJersey
XBB.1.5 is the top circulating lineage in NJ
17/n
Tracking the current #COVID19 wave, variant soup and #Hospitalizations in #Pennsylvania
XBB.1.5 and BQ.1.1 are the top circulating lineages in PA
[low sequence count]
18/n
Tracking the current #COVID19 wave, variant soup and #Hospitalizations in #Florida
[low sequence count]
19/n
Tracking the current #COVID19 wave, variant soup and #Hospitalizations in #Tennessee
Only 3 sequences with sample collection dates in the last 15 days available from TN
Not sure which variant is responsible for the surge!
[low sequence count]
20/n
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