Thread by @nextstrain

Thanks to #opendata sharing by @GISAID, we've updated nextstrain.org/ncov with 4745 new #COVID19 #SARSCoV2 sequences!

Check out the new sequences from Cameroon (20) on nextstrain.org/ncov/africa.

(Thanks to @acegid)

1/10

@GISAID @acegid You can find the new sequences from Australia (23) and New Zealand (8) on nextstrain.org/ncov/oceania.

(Thanks to @NSWHPathology, @WestSydHealth, @Sydney_Uni, @ESRNewZealand, @MathStorey, @Joepdl, @sciolato)

2/10

@GISAID @acegid @NSWHPathology @WestSydHealth @Sydney_Uni @ESRNewZealand @MathStorey @Joepdl @sciolato You can find the new sequences from Argentina (1), Bolivia (27), Brazil (27) and Colombia (38) on nextstrain.org/ncov/south-ame….

(Thanks to @CONICETDialoga @intaargentina @ProyectoPAIS4 @fiocruz @FiocruzAmazonia Instituto Adolfo Lutz @INSColombia)

3/10

@GISAID @acegid @NSWHPathology @WestSydHealth @Sydney_Uni @ESRNewZealand @MathStorey @Joepdl @sciolato @CONICETDialoga @intaargentina @ProyectoPAIS4 @fiocruz @FiocruzAmazonia @INSColombia New sequences from Bangladesh (1), China (1), India (17), Indonesia (25) and Iran (1) can be seen on nextstrain.org/ncov/asia.

(Thanks to Genomic Research Lab at #BCSIR @HZAU_China #virologynimhans @virology_chitra @lipiindonesia Pasteur Institute of Iran @institutpasteur)

4/10

@GISAID @acegid @NSWHPathology @WestSydHealth @Sydney_Uni @ESRNewZealand @MathStorey @Joepdl @sciolato @CONICETDialoga @intaargentina @ProyectoPAIS4 @fiocruz @FiocruzAmazonia @INSColombia @HZAU_China @virology_chitra @lipiindonesia @institutpasteur New sequences from Philippines (12), Singapore (15) and South Korea (1) can be found below.

(Thanks to @RITMPH @VetEssel @inezmedado NCID NPHL Singapore @KoreaCDC)

5/10

@GISAID @acegid @NSWHPathology @WestSydHealth @Sydney_Uni @ESRNewZealand @MathStorey @Joepdl @sciolato @CONICETDialoga @intaargentina @ProyectoPAIS4 @fiocruz @FiocruzAmazonia @INSColombia @HZAU_China @virology_chitra @lipiindonesia @institutpasteur @RITMPH @VetEssel @inezmedado You can find the new sequences from Belgium (59), Denmark (2341), France (24) and Ireland (92) on nextstrain.org/ncov/europe.

(Thanks to Rega Institute at @KU_Leuven @MedMicroLab_UA @MadsAlbertsen85 @kirk3gaard @CHUdeToulouse @nvrlucdireland)

6/10

@GISAID @acegid @NSWHPathology @WestSydHealth @Sydney_Uni @ESRNewZealand @MathStorey @Joepdl @sciolato @CONICETDialoga @intaargentina @ProyectoPAIS4 @fiocruz @FiocruzAmazonia @INSColombia @HZAU_China @virology_chitra @lipiindonesia @institutpasteur @RITMPH @VetEssel @inezmedado @KU_Leuven @MedMicroLab_UA @MadsAlbertsen85 @kirk3gaard @CHUdeToulouse @nvrlucdireland You can find the new sequences from Italy (329), Norway (13) and Serbia (17) below.

(Thanks to IZS dell Abruzzo e Molise G. Caporale @unibait @Tigem_Telethon ARGO Laboratorio Genomica ed Epigenomica IZSM Italy @Folkehelseinst @DejanVidanovic1)

7/10

@GISAID @acegid @NSWHPathology @WestSydHealth @Sydney_Uni @ESRNewZealand @MathStorey @Joepdl @sciolato @CONICETDialoga @intaargentina @ProyectoPAIS4 @fiocruz @FiocruzAmazonia @INSColombia @HZAU_China @virology_chitra @lipiindonesia @institutpasteur @RITMPH @VetEssel @inezmedado @KU_Leuven @MedMicroLab_UA @MadsAlbertsen85 @kirk3gaard @CHUdeToulouse @nvrlucdireland @unibait @Tigem_Telethon @Folkehelseinst @DejanVidanovic1 New sequences from Spain (1), Switzerland (6) and the UK (1176) can be found below.

(Thanks to @vallhebron @VHIR_ @UniSpitalBasel @AppliedMicrobi2 @tim_roloff @Ulf90 @MBattegay @TheBelsian Hans Hirsch Karoline Leuzinger & Andreas Widmer @CovidGenomicsUK)

8/10

@GISAID @acegid @NSWHPathology @WestSydHealth @Sydney_Uni @ESRNewZealand @MathStorey @Joepdl @sciolato @CONICETDialoga @intaargentina @ProyectoPAIS4 @fiocruz @FiocruzAmazonia @INSColombia @HZAU_China @virology_chitra @lipiindonesia @institutpasteur @RITMPH @VetEssel @inezmedado @KU_Leuven @MedMicroLab_UA @MadsAlbertsen85 @kirk3gaard @CHUdeToulouse @nvrlucdireland @unibait @Tigem_Telethon @Folkehelseinst @DejanVidanovic1 @vallhebron @VHIR_ @UniSpitalBasel @AppliedMicrobi2 @tim_roloff @Ulf90 @MBattegay @TheBelsian @CovidGenomicsUK New sequences from Canada (3), Guatemala (20) and Mexico (217) can be seen on nextstrain.org/ncov/north-ame….

(Thanks to @McMasterU @TIBDN @fiocruz @RespiraINER)

9/10

@GISAID @acegid @NSWHPathology @WestSydHealth @Sydney_Uni @ESRNewZealand @MathStorey @Joepdl @sciolato @CONICETDialoga @intaargentina @ProyectoPAIS4 @fiocruz @FiocruzAmazonia @INSColombia @HZAU_China @virology_chitra @lipiindonesia @institutpasteur @RITMPH @VetEssel @inezmedado @KU_Leuven @MedMicroLab_UA @MadsAlbertsen85 @kirk3gaard @CHUdeToulouse @nvrlucdireland @unibait @Tigem_Telethon @Folkehelseinst @DejanVidanovic1 @vallhebron @VHIR_ @UniSpitalBasel @AppliedMicrobi2 @tim_roloff @Ulf90 New sequences from the USA (230) can be found below.

(Thanks to @QuestDX @HealthySCC @AnnePiantadosi @Ahmed_HBabiker @EmoryPathology @MDHealthDept Wyoming Public Health Lab @lapublichealth @uwlabmedpath @UW @scdhec @UWVirology @pavitrarc)

10/10