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Raj Rajnarayanan Profile picture
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Oct 19 • 5 tweets • 5 min read
"The fact that BQ variants are rising in the region make it a likely contender to generate a wave throughout the rest of the country"

The country can “be alerted quickly” to a coming #BQwave by looking at #NewYork data

H/T @ErinMPrater @FortuneMagazine

#Cerberus #Typhon
Current #COVID19 #Hospitalizations in #NewYork

coronavirus.health.ny.gov/daily-hospital… Image
Newly reported #COVID19 #Hospital admissions in #NewYork Image
#COVID19 #TestPositivity Tracker - #NewYork Image
Source: coronavirus.health.ny.gov/covid-19-data-…

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More from @RajlabN

Raj Rajnarayanan Profile picture
Oct 21
#SARSCoV2 #VariantProportions - #USA |10/21/22

@CDCgov #Nowcast estimates

BA.5*: 62.2%
BA.4.6: 11.3%
BQ.1*: 9.4%
BQ.1.1*: 7.2%
BF.7*: 6.7%
BA.2.75.2*: 1.3%

Does not include recombinant lineage XBB yet

covid.cdc.gov/covid-data-tra… Image
Consistent with #USA #Varaintdashboard - #15DayTrends

Granular details - #VariantDashboard #USA #15DayTrends

Read 4 tweets
Raj Rajnarayanan Profile picture
Oct 21
#Omicron family swells to 500+ sublineages!

Currently, we are watching "Omicron" BQ.1.1*

Expected to outcompete other Omicrons in circulation including Omicron.BA5*

Omicron.BJ1/ Omicron.BM.1.1.1 recombinant XBB might give a tough fight to Omicron.BQ.* Image
Introducing Omicron BQ* family

All of them are Omicrons too... Omicron.BQs

- 36 of them as of now.. Image
Introducing Omicron BA.2.75* family

All of them are Omicrons too.. Omicron BA.2.75s

-69 of them as of now Image
Read 6 tweets
Raj Rajnarayanan Profile picture
Oct 21
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

17.0% BA.5.2.1
10.8% BA.5.2
10.7% BA.4.6
6.9% BA.5.1
2.7% BF.7
2.6% BF.10
2.5% BA.5.5
2.2% BQ.1
2.1% BA.5.6
2.1% BF.5

Tracker: tinyurl.com/mryj4uu7

#OmicronUpdates 10/20/22
1/n Image
Sequence count by US State

Share of sequences with sample collection dates in the last 15 days.

2/n Image
15 of the 2729 sequences are from opt-in voluntary airport screening with sample collections dates in the last 15 days

3 BQ.1.1 (NY, GA, CA)
1 BQ.1 (CA)

#MaskUp in✈️🛳️🚍🚉etc

3/n
Read 20 tweets
Raj Rajnarayanan Profile picture
Oct 20
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

17.1% BA.5.2.1
10.5% BA.5.2
10.3% BA.4.6
7.0% BA.5.1
2.6% BA.5.5
2.6% BF.10
2.5% BF.7
2.4% BQ.1.1
2.1% BQ.1
2.1% BF.5

Tracker: tinyurl.com/mryj4uu7
#OmicronUpdates 10/19/22
1/n Image
Sequence count by US State

Share of sequences with sample collection dates in the last 15 days.

2/n Image
21 of the 3203 sequences are from opt-in voluntary airport screening with sample collections dates in the last 15 days

3 BQ.1.1 (NY, GA, CA)
2 BQ.1 (NY, CA)
2 BM.1.1 (NJ)

#MaskUp in✈️🛳️🚍🚉etc

3/n
Read 18 tweets
Raj Rajnarayanan Profile picture
Oct 20
Tracking #SARSCoV2 #Convergent #Lineages ( aka #VariantSoup) over time - Globally | #30DayTrends

BQ.1.1 is currently leading the charts!
Followed by BQ.1, BA.2.75.2*, XBB.1 and BA.2.3.20

Tracker: public.tableau.com/app/profile/ra…

Updated 10/19/2022 7:30 pm
Note: Tracker includes Preselected from Austria and Airport Screening from Japan and USA
Top Lineages with Convergent Mutations-

BQ.1.1
BQ.1
BA.2.75.2
XBB.1
BA.2.3.20
BN.1
BM.1.1.3
BA.2.75.5
BL.1
BQ.1.2
...

3/n Image
Read 5 tweets
Raj Rajnarayanan Profile picture
Oct 18
#COVID19 #VariantDashboard - #UnitedStates

TOP lineages (15-DAY TRENDS):

17.4% BA.5.2.1
11.2% BA.5.2
10.1% BA.4.6
6.8% BA.5.1
2.9% BF.10
2.5% BF.7
2.4% BQ.1.1
2.3% BQ.1
2.2% BA.5.5
1.9% BF.26

Tracker: tinyurl.com/mryj4uu7

#OmicronUpdates 10/18/22
1/n Image
Sequence count by US State

Share of sequences with sample collection dates in the last 15 days.

2/n Image
7 of the 3263 sequences are from opt-in voluntary airport screening with sample collections dates in the last 15 days

1 BQ.1 (NY)
1 BM.1.1 (NJ)

#MaskUp in✈️🛳️🚍🚉etc

3/n
Read 15 tweets

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