⚠️SURGING #B117 WITHIN US—growing 7% per day, doubling every 9.8 days nationally, & expected to become dominant by March 23rd. It is surging fastest in Florida—doubling every 9.1 days. Scientists are extremely worried: 35-45% more transmissible.🧵#COVID19
washingtonpost.com/health/ukvaria…
2) new preprint, led by @K_G_Andersen, “Our study shows that US is on a similar trajectory as other countries where B.1.1.7 rapidly became the dominant #SARSCoV2 variant, requiring immediate and decisive action to minimize #COVID19 morbidity and mortality” medrxiv.org/content/10.110…
3) Here is the current inferred number of #B117 cases in each state and in Florida and California, to Jan 30th.
4) Florida seems to be experiencing the faster rate of growth. (Maybe because @RonDeSantisFL @GovRonDeSantis hasn’t put in much mitigation). #B117 will become dominant in Florida sooner... likely by March 8th.
5) Why is #B117 worse than other #SARSCoV2? It carries a package of mutations, including many which change the structure of the spike protein that enhance its ability to bind to human ACE2 receptor, yielding higher viral loads, and may shed more virus when coughing or sneezing.
6) “It is here, it’s got its hooks deep into this country, and it’s on its way to very quickly becoming the dominant lineage,” said Michael Worobey, an evolutionary biologist at the University of Arizona and a co-author of the new paper.
7) other wild cards in play, in the form of additional variants, such as #B1351 from South Africa and worrisome because it contains a mutation (E484K, nicknamed “Eeek”) that lowers but does not entirely undermined the efficacy of vaccines.
8) Will return to Eeek mutation later, but #B117 also led to a super outbreak that infected 10% of an entire Italy 🇮🇹 village in just a few weeks. 140 of 1400 residents. 60% children.
9) As explained 2 days ago, don’t be deceived that total cases are dropping, there is actually a surging underbelly of #B117 cases that is much much more transmissible and will cause another surge soon in March and April. Please read this 🧵 below.
10) Here is what is going to happen... currently R is ~0.9 in many places, but with the more infectious #B117, the R will jump 50% approximately. And it is inevitable (all CDC and Danish models say this) that B117 will take over as the reigning dominant variant soon—Alberta 🇨🇦
11) Danish models show the same thing. Unless we slam the R current to <0.7, but optimally <0.6 right now, we will be in a world of trouble soon.
12) And Germany 🇩🇪 also shows the same phenomenon—that #B117 will become the dominant reigning variant (new strain??) and cause a late March / April new surge. Especially if vaccine rollout is slow. sueddeutsche.de/wissen/coronav…
13) The solution to defeating the #B117 is to chase a #ZeroCovid approach and slam the R even lower to below 0.7.... but optimally 0.6 or less. So that even when the #B117 arises, it will keep R under 1 (0.6*1.5=0.9). And by keeping R at 0.6 now—we will have buffer room for B117.
14) other way to win is with fast mass vaccination like in Israel 🇮🇱 that has already vaccinated 60 shot per 100 people in the elderly. Hence now look how fast the cases, hospitalizations are diverging for those age 60+ vs 59 or under. That is the effect of **mass** vaccinations.
15) Israel with 60 shots per 100 people (note 200 per 100 needed for full coverage, which we can only do when kids vaccine approved) is currently 4x 🇬🇧 and 6x ahead of the US. We need to all get to Israel level vaccinations by March...
16) And vaccines do work well for the general #B117 variant. Just a bit attenuated for South African #B1351 variant that has the E484K “Eeek” mutation. See thread 🧵
17) ...But we also discovered the #B117 has a sublineage with also the E484K “Eeek” mutation. UK researchers found it in 11 people across England and Wales. And there is some concern about this.
18) So what do we know about the #B117+E484K combo sublineage? Not much except this preprint study showing it is might be more resistant to antibody neutralization (more antibodies needed in lab study to neutralize the pseudovirus) than the common strain and the regular B117.
19) We don’t know about vaccine resistance yet, but could #B117+E484K be bad? it emerged in UK twice—independently arising in Wales, and in England, plus in 🇧🇷 & 🇿🇦—so 4 times means convergent evolution is real. And convergent evolution is usually always greater survival fitness.
20) #B117 is becoming a beast. Israel is seeing a sharp rise in the number of children and teens getting infected with #COVID19. “This is something we did not witness in previous waves,” Health Minister Yuli Edelstein said. Some think it’s due to B117. jpost.com/health-science…
21) More than 50,000 🇮🇱 children and teens have gotten #COVID19 since the start of Jan, many more than in any month during 1st/2nd waves.

“We got a letter from the Israeli Association of Pediatrics that says they are very worried about the rate of disease in younger students”
22) “one hypothesis is that it is tied to 🇬🇧#B117 mutation, which has spread rapidly across Israel.”

“The British variant is more contagious, so it increases the chances of infection in children,” Cyrille Cohen, head of Bar-Ilan University’s immunotherapy laboratory, told JPost.
23) We might end up back at square one if we don’t stop these mutants. It was just discovered this week that the #B1351 variant with the Eeek mutation is so evasive —people with prior #COVID19 has no extra protection against this variant —not even for severe reinfection!! See 🧵
24) BOTTOMLINE: “We have to be concerned about the mutants”.

Fauci is right about the concern of #B117, #B1351, #P1.

We gotta end pandemic fast with vaccines and #ZeroCovid approach, or else we will be back to square one again. Another wave is brewing.
25) Summary of the vaccines and their efficacy and also for the mutations.

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More from @DrEricDing

9 Feb
📍Outbreak of #B117 despite full vaccinations at a nursing home. 14 residents at a 🇩🇪 nursing home have tested positive for 🇬🇧 B117 variant, despite all having 2 doses of the BioNTech-Pfizer #COVID19 vaccine—last shot on Jan 25. All mild.

➡️Keep masking. dw.com/en/coronavirus…
2) This situation highlights the needs to continue to wear masks. Transmission vs protection against severe disease clearly are two different things.

Anyone refusing to mask because they say they have vaccine —remind them they still need to mask until pandemic is over! #COVID19
3) Granted, it takes 2 weeks to develop immunity, but they already had 1 dose with that lag time. And though it’s <2 weeks after 2nd dose, this highlights that protection is not complete, and even then it’s only 95% not 100%.
Read 5 tweets
9 Feb
NEW—Austria 🇦🇹’s alarming #B1351 variant outbreak is growing. Not only 293 cases of 🇿🇦-origin variant identified in Tyrol—9 suspected cases of B1351 are currently suspected in 2 kindergartens in Salzburg, plus 9 more in 🇦🇹 military. #B1351TyrolSub #COVID19 derstandard.at/story/20001239… Image
2) the #B1351 variant also possibly causing an outbreak in Austria’s armed forces, with one Tyrol soldier linked to 9 cases. #B1351TyrolSub
oe24.at/coronavirus/su…
3) Earlier, Germany 🇩🇪 is planning to close the border, and Austria internally debating whether to close the internal border to Tyrol.
Read 6 tweets
9 Feb
FROZEN FOODS—"We know that the virus can persist & survive in conditions that are found in these cold and frozen environments.” More work needs to be done to understand "the possible role of the cold chain, frozen products in the introduction of the virus”, says WHO Peter Embarek Image
2) Previously, frozen seafood exposure was shown it could possibly lead to infection. #COVID19
3) this frozen food transmission issue has been investigated a lot in China.
Read 5 tweets
9 Feb
WORLD’s SECOND SINGLE DOSE #COVID19 vaccine—an Ad5-nCoV vaccine by CanSino, showed 91% efficacy rate in preventing severe disease, & effective to prevent 65.7% of symptomatic diseases in P3 trial. Comparable to J&J’s 66% efficacy, with no freezing needed. bloomberg.com/news/articles/…
2) single-shot vaccines offer some advantages over the cutting-edge mRNA inoculations from Pfizer and Moderna. The mRNA two-dose shots require deep-freeze storage and risk spoiling if thawed too quickly. CanSino and J&J’s candidates are easier to store...
3) and don’t require people to return at a set time for the second jab -- something that’s hard to guarantee especially in developing countries. “The single-shot is an important factor—when you ask people to show up for a 2nd shot 3 weeks later, people will forget or not care.”
Read 4 tweets
8 Feb
OUTBREAK OF #B1351 VARIANT IN AUSTRIA 🇦🇹—B1351 🇿🇦 variant now identified in 293 cases in western Austria state of Tyrol—at least 140 active cases. Germany🇩🇪 is considering closing the border to Tyrol. Austria govt has issued urgent travel warning. #COVID19
tagesschau.de/ausland/europa…
2) “Experts rated the South African mutation as more dangerous than the British one. "The course of the disease should be more severe and the resilience to vaccinations should be higher. This mutation would set us back a long way."
3) Folks, Tyrol is a very popular Alpine tourism region of Austria that is bordered by Germany 🇩🇪 to the north, Switzerland 🇨🇭& Liechtenstein 🇱🇮 to the west, and Italy 🇮🇹 to the immediate south. If it’s in Tyrol, it’s likely all over Central Europe. And that what is worrisome.
Read 20 tweets
8 Feb
Immunocompromised 45 year old suffered from #COVID19 for 155 days before he died. The virus was changing very quickly inside the man's body—it acquired a big cluster of >20 mutations—resembled the same ones seen in #B117 & #B1351. (NPR audio Part 1 of 2)🧵
npr.org/sections/goats…
2) NPR report audio part 2 of 2:

Dr. Li couldn't believe what they found. "I was shocked," he says. "When I saw the virus sequences, I knew that we were dealing with something completely different and potentially very important."
3) “Toward the very end of his life, he was treated with monoclonal antibodies, from Regeneron," Li says. "And shortly thereafter, we saw evidence that suggested the virus was developing resistance or escaping from these antibodies as well."
Read 14 tweets

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