Elinor Karlsson Profile picture
Apr 30 19 tweets 16 min read
Perceptions of #dog breed temperments are ingrained in our culture. Breed #stereotypes play out in dog parks, show up in city ordinances & leases, are celebrated at dog shows, and infuse Hollywood movies... but what if I told you dog temperment doesn't work like that? 1/n Morpheous from the Matrix "But what if I told you"
ANNOUNCING OUR NEW, AT-LEAST-8-YEARS-IN-THE-MAKING-BUT-WHO'S-COUNTING, +FANCY-GENOMICS #DOG temperment PAPER!!!! @UMassChan @broadinstitute @karlssonlab @darwinsarkfnd #ScienceResearch @iaabc 2/n science.org/doi/10.1126/sc… Image of tweet showing April 29 issue of Science with a phot
Before I unpack our findings, I have a conflict of interest to disclose: I AM A CAT PERSON. 3/n
THE DATA:
18,385 dogs (including 2,155 w genetic data)
177 breeds represented
9,376 mutts (mixed/unknown ancestry)
1,830,556 owner survey responses @Gencove @TerraBioApp @BroadGenomics @NeogenCorp 4/n Photo array of 112 pet dogs enrolled in Darwin's Ark
Our idea: People know their dogs ... and REALLY like to talk about them. Let's ask them at darwinsark.org! All dogs welcome: purebred, mixed breed, mystery dogs. From anywhere in world. Result? DATAPALOOZA! @designerguy #OpenData #CitizenScience #citizensciencemonth 5/n
It all started in 2014 under (now sadly gone) phylomobile @broadinstitute
"What do you do?"
"Dog genomics"
Out comes phone.
"This is my dog Max! He does the funniest things"
It hit me. THIS IS DATA. darwinsark.org was born #ScientistsScience #CitizenScience Photo of Broad Institute's mammal phylomobile with elephant
You've probably heard #breed stereotypes. "Of course my dog is friendly - it's a golden". But are golden retrievers unusually friendly? Are Siberian huskies mischievous? Are beagles stubborn? Are chihuahuas vigilant? 7/n Happy dog swimming with a ball in their mouth. By Bob Haarma
NOT SO MUCH! Less than 9% of the variation in temperment traits are explained by breed. Owners reported huge range of temperments in every breed, making it impossible to accurately predict an individual dog's temperment from its breed alone 8/n science.org/doi/10.1126/sc… Distribution of behavioral factor scores (based on owner sur
Border collies are on average more "biddable", and labradors are on average more "human social" (comfortable w unfamiliar people) but plenty deviate from expected

Doubtful? Explore what owners told us for yourself: darwinsark.org/muttomics_dog_… @codeanticode 9/n Animation of dog with treat on his nose. Credit: K. Morrill
Which breeds are significantly different on which traits? We tested thru permutation: Choose 25 beagles & 25 other dogs at random (imagine pulling dogs out of very big hat) & measure difference. Repeat 500,000 times. For every breed. For every trait. 10/n science.org/doi/10.1126/sc… Graph showing permutations results for 8 factors for 17 bree
Confounder alert! Do breed stereotypes influence owner responses? "OF COURSE my lab loves people" “Of course my pointer points!" But we have PERFECT stereotype control: mutts aka "who knows?" ancestry dogs. First author @morrilleen explains: 11/n For six dogs that have a similar amount of genetic ancestry
What was least heritable AND least connected to breed? "Agonistic threshold" aka "how easily dog is provoked by a frightening, uncomfortable, or annoying stimulus" aka "aggression". We found no support for policies targeting particular breeds 12/n science.org/doi/10.1126/sc… Exploratory factor analysis finds eight inferred factors. In
Which breed gets bragging rights as smartest? Dogs from herding breeds tend to be more biddable (respond to human direction). But is that intelligence? Dogs from toy breeds tend do their own thing, but they may still get what they want! 13/n science.org/doi/10.1126/sc… Figure from paper showing that, on average, 9 herding breeds
Dogs are dogs, no matter the breed. We’ve lived side-by-side >10,000 years

Breeds are less than 200 years old

We changed what dogs look like - not who they are. Dogs love life (96% of participants agree), love their people (92% agree) & are curious about world (90% agree) 14/n Photograph of petroglyphs taken by wvbailey, at the easily-a
9 out 10 of our participants agree: their dogs seek human companionship. Life experiences have huge effect on your dog's temperment. It's on us to provide training, enrichment, and companionship pet dogs need. Just ask Bandit @Mammals_Suck 15/n
Dogs & people aren't that different. Nearly all the same genes doing mostly the same thing. Dogs share our homes, food, activity levels, and even microbiomes. Your couch IS their natural habitat. Dogs are a powerful & complex natural model @DogAgingProject @adriakarlsson 16/n Two dogs, one cat and person with laptop on a couch. Credit:
#GWAS time! Gets stuck behind objects? association near gene linked to cognitive performance. Howling? gene involved in human speech development. Friendly with strangers? gene involved in long-term memory formation. Conclusion: ALL DOG GENOMICS WORKS 17/n science.org/doi/10.1126/sc… Regional association plot of GWAS scores on Q36 “gets stuc
The future of #dog #science is here. We're harnessing the #genetic & #environmental complexity of dogs as individuals, and the close bond between people and dogs. Sign up today for DarwinsArk.org and partner project @DogAgingProject 18/n Patron, mascot dog of State Emergency Service of #Ukraine in
So what’s next? PUPPIES. In this paper, we show behaviors like retrieving, herding, pointing, howling, etc are unusually heritable. But how does a change in DNA drive a dog to retrieve? How can watching puppies videos help? Stay tuned ... 19/19 END @dnagenotek

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More from @eenork

Jan 24, 2020
Ever shattered an orange using liquid nitrogen? That's how we get DNA out of ticks in our new @FrontiersIn article frontiersin.org/articles/10.33… @UMassMedical @broadinstitute @karlssonlab
We have a lot of ticks. 1000s & 1000s of ticks. People send them to us as part of our #citizenScience #tick disease study ProjectAcari.org. The problem? getting the DNA out.
We want to use high-throughput #DNA sequencing to find out everything we can about each individual #tick - its species, its intestinal #microbiome (they have one too!), and if it carries dangerous pathogens.
Read 20 tweets
Jan 14, 2020
#scientist/#artists: can you help? Made 130 new mammal genomes for @genome_gov @scilifelab @broadinstitute #200Mammals project (#opendata @NCBI). Highlighting each species (list in thread) on new website - need photos! (will credit). DM me. Pls retweet #ScienceAlly @PAGXXVIII
Looking for portrait type photos for each species "profile". Listed by common name below. Full list w scientific names at broad.io/200Mammals (also interested in photos/stories about huge effort / communities involved in collecting #DNA samples. Genome seq is easy part!)
Read 13 tweets
Dec 3, 2019
We have a new paper out today in @Trends_Ecol_Evo (open access). "The History of Farm Foxes Undermines the Animal Domestication Syndrome" @Greger_Larson @UMassMedical @broadinstitute @karlssonlab sciencedirect.com/science/articl…
It all started with an unplanned visit to a museum on Prince Edward Island by the late Dr. Raymond Coppinger, and ended with us questioning a widely accepted theory known as the domestication syndrome. @culturesside
culturesummerside.com/international-…
The (animal) domestication syndrome is the idea that, when an animal species is domesticated, a suite of changes in behavior and appearance all occur together. It was first described by none other than Charles Darwin.
Read 15 tweets

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