Mia Malan Profile picture
14 Dec, 27 tweets, 23 min read
BREAKING [Thread]: 1. SA’s first real-world data on #Pfizer’s #COVID19 jab’s protection @ #Omicron infection + hospitalisation via @Discovery_SA + @MRCza

Note: This is data from the 1st 3 weeks of the outbreak, so it might change - regard it as preliminary real-world data Image
2. What data are findings based on?
1. @Discovery_SA = SA’s largest health insurer (3.7 mil members)
2. They used 211,000 positive #COVID19 PCR tests of adults (18+)
3. 41% of 211,000 + tests = received 2 doses of #Pfizer ImageImage
3. Here is how #Omicron has progressed in SA:
#Omicron = now 90% of #COVID infections in SA ImageImage
4. How effective is #Pfizer’s jab @ hospitalisation due 2 #Omicron?
1. 2 doses of #Pfizer’s jab makes vaccinated people 70% less likely 2 get hospitalised vs. unvaccinated people
2. This = lower than 93% protection the jab gave in SA’s #Delta wave (93% = @Discovery_SA data) Image
5. Protection of 2 doses of #Pfizer @ hospital admission due to #Omicron is maintained across all ages (18-79 years), but slightly lower for older age groups:
18-29: 92%
30-39: 75%
40-49: 82%
50-59: 74%
60-69: 67%
70-79: 59%
6. Important to note that the lower protection (down from 93% to 70%) against hospitalisation because of #Omicron could be because older people were vaccinated first in SA, so there has been a longer period for vaccine-derived immunity to wane than with younger age groups
7. 70% protection for vaccinated people @ hospital admission = still a high level of protection. WHO regards a #COVID19 vaccine effective if it provides 50% protection: bit.ly/325K60Y
8. What about the risk of hospitalisation due to #Omicron infection compared to the variant (D614G) which dominated SA’s 1st #COVID wave?

Adults (18+) infected with #Omicron = 29% less likely to be hospitalised vs. infection with other variants Image
9. What are confounding factors for #Omicron real-life hospital admission data in SA?
High seroprevalence #SARS-CoV2 antibody levels in SA population (so antibodies due to previous #COVID19 infection) - in Gauteng = as high as 70% + of people
10. Hospital admissions (anecdotal data):
1. Most #Omicron admissions = unvaccinated people (16% of ICU admissions = vaccinated)
2. High % of incidental admissions (people going 2 hospital 4 things other than #COVID + test 4 admission + find out they have #COVID) Image
11. Out of hospital data (anecdotal):
1. @Discovery_SA is seeing milder illness with #Omicron (early data) with recoveries within 3 days
2. Higher reinfections (so people who've had #COVID19 get infected again) and breakthrough infections (vaccinated people getting infected) Image
12. #Omicron cases are growing much faster than during the #Delta wave, but hospitalisations slower. For the Omicron wave, SA has reached 60% of cases reached during the #Delta peak but we have reached only 20% of the hospital admissions of the Delta wave. Image
13. Children and #Omicron:
1. Main diagnoses 4 kids who get hospitalised = bronchiolitis and pneumonia, often with severe gastrointestinal symptoms + dehydration
2. Most kids = not hospitalised = mild symptoms (sore throat, nasal congestion, headache, fever, resolves in 3 days) Image
14.
1. Kids below 18 infected with #Omicron = 20% higher risk of admission 4 #COVID19 complications vs. 1st wave
2. This aligns with the 3rd #Delta wave (June-Sep 2021) when an increase in pediatric admissions (0-5 yrs) = also seen (so 4th wave risk = similar to 3rd wave risk)
15. To date, kids below 5 = higher admission risk than adults, but this could be driven by incidental admissions. This trend is starting to change: it looks like fewer children and more adults are starting to get admitted (@nicd_sa = similar findings). Image
16. NB data to point out re children:
1. The risk of kids testing + for #COVID19 because of #Omicron = 51% lower compared to adults
2. @nicd_sa/@MRCza data from Tswhane show most kids = admitted 2 hospital = incidental admissions
17. Vaccinated people = 33% less likely 2 get infected with #Omicron than unvaccinated people (this is a drop from 80% protection during the #Delta wave)

Here's how #Pfizer protection @ infection wanes 4 Omicron:
1. 2-4 wks after 2nd dose: 56%
2. 3-4 mnths after 2nd dose: 25% Image
18. What about the risk of reinfection?

1. People infected with #Delta = 40% relative risk of reinfection with #Omicron
2. People infected with Beta = 60% relative risk of infection with Omicron Image
19. More data on the reinfection risk with #Omicron:

@SACEMAdirector et al. in SA found the relative risk of reinfection with #Omicron for people who previously had #COVID and get exposed again = 3 times higher than for reinfection with #Delta/#Beta:
20. Two shots of #Pfizer continues to provide good protection @ hospitalisation, but protection has dropped from 93% with #Delta to 70% with #Omicron. Image
21. The protection @ hospitalisation that 2 shots of #Pfizer provide @ #Omicron infection for different ages:
- Highest protection = 18-29 yrs
- Lowest protection in 70-79 yrs
(Could be because 70-79 = vaccinated before 18-29, so = been more time for 70-79's immunity 2 wane) Image
22. This graph shows that #Omicron infection is associated with a 29% lower risk of hospital admission for adults compared to the 1st wave, but children have a 20% higher admission risk (but as mentioned previously, looks like it's starting to change). Image
23. Although excess deaths were high for the week of 28 Nov, it's still much lower than in previous #COVID19 waves (this correlates with lower #Omicron death rate data in hospitals, but it's early times) Image
24. How did @Discovery_SA obtain #PCR test data?
1. Results from @LancetLab_ZA [private lab] (45%)
2. Gauteng test results 55%
3. Results from hospital patients 8% Image
25. Summary:
1. Vaccination continues to provide significant protection @ falling seriously ill with #COVID (although reduced to 70%)
2. High nrs of breakthrough infections in vaccinated people (protection @ infections reduced from 80% to 33%)
3. Reinfection risk = increased Image
Pass word for recording = Q8e3aQ

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More from @miamalan

12 Dec
[Thread]: Explanation:

Why will the price of #PCR #COVID19 tests in SA's private sector GO DOWN from R850/test to R500?

An agreement was reached between the Competition Commission and 2 major private labs, Ampath (Du Buisson Kramer Swart Bouwer Incorporated) + @LancetLab_ZA.
2. What are #PCR #COVID19 tests?

They're the gold standard of #COVID19 testing and are also called molecular tests. PCR tests detect genetic material of #SARSCoV2 (the COVID virus) using a lab technique called polymerase chain reaction (PCR). More:
bit.ly/31I43Lv
3. So #PCR tests are those tests for which a #HealthWorkers take a long swab and insert it into the back of your throat (oropharyngeal swab). These are the tests that you require for international traveling.
Read 8 tweets
10 Dec
Update on #Omicron in SA via @Dr_Groome from @nicd_sa (presented @ Fri's @heatlhza press briefing):

[Thread]

1. The 7 day moving average of new #COVID19 cases = increased 40-fold between 16 Nov (332) + 8 Dec (13,237)
2. This increase is much steeper than in any previous wave
2. @Dr_Groome:
1. The increase in new #COVID19 cases = mostly driven by Gauteng, where the #Omicron outbreak started
2. Left graph = absolute nr of cases, right graph = incidence (new cases), accounted for population size = starting to see increases in other provinces too
3. What do new #COVID19 cases look like by age?
1. Early on in the #Omicron wave we saw more cases in younger age groups
2. Currently, the incidence is highest in the 20-39 year and 40-59 year group, followed by the 60+ year group
Read 18 tweets
10 Dec
[Thread] What's happening with #COVID19 vaccine boosters in SA?
Nicholas Crisp, @healthza:
1. #Pfizer boosters (3rd shots) = approved this week for 6 mnths after a 2nd shot
2. The 1st group of people = vaccinated on May 17 (start of rollout) + would qualify 4 a booster on 28 Dec
2. Nicholas Crisp, @healthza:
1. @healthza needs a recommendation from the vaccine MAC before it can start with a booster rollout
2. If approved, the rollout will start in early Jan (not on the 28 Dec when the 1st person technically qualifies)
3. Nicholas Crisp, @healthza: When will people who got jabbed with #JnJ get boosters?

1. #JnJ applied for @SAHPRA1 booster approval on Thu
2. Sahpra = review application over the weekend + make a recommendation next week
3. #JnJ + #Pfizer boosters = rolled out simultaneously
Read 4 tweets
10 Dec
[Thread] Why have 2nd #Pfizer doses for teens (12-17 yrs) been opened in SA?

Nicholas Crisp, @healthza:
Real-life data now shows the risk of myocarditis (heart inflammation) for teens after 2 shots of #Pfizer's vaccine is more or less the same as for the general population
2. Nicholas Crisp, @healthza:

Real-life data shows there is an increase in myocarditis among teens who get #COVID infection, so full vaccination (2 #Pfizer shots) will protect them against falling seriously ill with it.
3. Watch this video to learn more about the extremely low risk of heart inflammation after a #COVID19 vaccination for teens: bhekisisa.org/multimedia/202…
Read 5 tweets
10 Dec
[Thread] #JoePhaahla:
1. 67 countries have reported the #Omicron
2. There has been a 400% increase in weekly cases in KZN (week of 4 Dec compared to previous week)
2. #JoePhaahla
1. Hospital admissions increased by more than 200% (week of 4 Dec vs previous week)
2. #Omicron = dominant variant in Nov 2021 in SA (70% of specimens = Omicron, mostly Gauteng)
3. Omicron = the variant driving increase in cases in Gauteng over last 3 weeks
3. #JoePhaahla:
1. #Omicron is likely more transmissible than the #Delta variant based on the nr of increased #COVID19 cases in SA
2. #Omicron has replaced the #DeltaVariant as the dominant variant in Gauteng
Read 9 tweets
9 Dec
Martin Friede, WHO
[Thread]

1. The mRNA technology transfer hub in Africa forms part of a larger plan to make #vaccines more available in less developed countries
2. The hub forms part of the last arm of the strategy: "to initiate regional health security via vaccine production"
2. The #COVAX manufacturing taskforce has 3 workstreams that address different needs. The #mRNAHub falls under workstream 3. The aim = to improve the nr of Africa companies that can make vaccines.
3. Many issues had to be considered when setting up the hub. For instance, how they will deal with IP rights, regulatory issues (how jabs will be approved in countries), funding and how clinical trials will be conducted.
Read 12 tweets

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