🧵🧵 THREAD: 9 tips for successful #bioinformatics #projects 🧵🧵
1. Start by defining the aim, scope, and objectives of your project, and by identifying the #biological and #computational questions you want to answer.
2. Identify the #data sources, types, and formats, that are relevant and available for your project, and evaluate their quality, quantity, and suitability.
3. Select the tools, methods, and #algorithms, that are appropriate and effective for your #project, and consider their performance, accuracy, and limitations.
4. Develop a clear and reproducible #workflow, that outlines the steps and tasks, and describes the data and tools, used in your project.
5. Use good software engineering practices, such as #version #control, #testing, and #documentation, to ensure the #reliability, #efficiency, and #maintainability of your code and results.
6. Use good data management practices, such as organization, #annotation, and provenance, to ensure the #security, #integrity, and #accessibility of your data and results.
7. Use good #computational #infrastructure, such as #cloud #computing, #containers, and #pipelines, to ensure the scalability, portability, and extensibility of your project.
8. Use always your scientific mindset, this will guide you through great hypothesis testing, experimentation, and reproducibility, to ensure the validity, robustness, and generalizability of your results.
9. project management: #planning, #monitoring, and reporting, to ensure the timely, efficient, and effective execution of your project.
Cloud genomics is a community of like-minded people looking forward to learn more about #Bioinformatics. Follow us for more information and support. #bioinformatics #computationalbiology #projectmanagement

• • •

Missing some Tweet in this thread? You can try to force a refresh
 

Keep Current with Cloud Genomics Training

Cloud Genomics Training Profile picture

Stay in touch and get notified when new unrolls are available from this author!

Read all threads

This Thread may be Removed Anytime!

PDF

Twitter may remove this content at anytime! Save it as PDF for later use!

Try unrolling a thread yourself!

how to unroll video
  1. Follow @ThreadReaderApp to mention us!

  2. From a Twitter thread mention us with a keyword "unroll"
@threadreaderapp unroll

Practice here first or read more on our help page!

More from @CloudGenomics

Dec 12
🧵🧵 THREAD: #Bioinformatics applications - a deep dive into #pipelines and #workflows 🧵🧵
1. #Bioinformatics is the application of #computational techniques to the #analysis of #biological #data, such as #sequences, #structures, and #interactions, and is an essential field of modern biology and medicine.
2. #Bioinformatics has many exciting applications in various fields, such as #genetics, #genomics, #proteomics, and #metabolomics, that can provide new insights into the workings of living systems, and can help to advance science and society.
Read 8 tweets
Dec 10
🧵🧵 THREAD: #Bioinformatics and #AlphaFold 🧵🧵
1. #AlphaFold is a deep learning system developed by #DeepMind, to predict the 3D #structure of #proteins from their #aminoacid sequence.
2. #AlphaFold has been applied and tested extensively in the biennial #CASP (Critical Assessment of protein Structure Prediction) experiment, and has achieved state-of-the-art performance.
Read 9 tweets
Dec 9
🧵🧵 THREAD: 10 reasons why #bioinformaticians should use #Nextflow 🧵🧵
1. #Nextflow is an open-source platform for #bioinformatics #pipelines and #workflows, designed to make them #scalable, #reproducible, and #portable.
2. #Nextflow allows #bioinformaticians to write their #pipelines and #workflows in a simple and expressive domain-specific language, called #Nextflow Script.
Read 11 tweets
Dec 8
🧵🧵 THREAD: The role of #cloud #computing in #bioinformatics 🧵🧵
1. #Cloud #computing allows #bioinformaticians to access and analyze large and complex #biological #data sets in a fast, scalable, and cost-effective manner.
2. The #cloud provides a flexible and dynamic #infrastructure that can be easily adjusted to the changing needs and demands of #bioinformatics projects.
Read 8 tweets
Dec 7
🧵#Bioinformatics applied to genomics, a THREAD🧵🧵:
#Genomics is the study of the entire #genetic makeup of an #organism, including its #DNA sequence, #gene structure, and regulation of #gene #expression.
#Bioinformatics is the application of computational techniques, such as #machine #learning and data mining, to the analysis of large datasets of biological information, such as #genomic, #proteomic, and #metabolomic data.
Read 9 tweets
Dec 5
Are you interested in getting started in #bioinformatics but not sure where to begin? Here are some tips to help you get started on your journey. A THREAD🧵🧵:
Start by learning a high-level #programming language, such as #Python or #R, and familiarizing yourself with data structures and #algorithms commonly used in #bioinformatics. The #BioPython and #Bioconductor libraries are great resources for this.
Next, learn about #genomic data formats and standards, such as #FASTA, #FASTQ, and #GFF. This will allow you to effectively manipulate and analyze large-scale #genomic #datasets. The #NCBI SRA and #EBI ENA databases are great places to find real-world data to work with.
Read 12 tweets

Did Thread Reader help you today?

Support us! We are indie developers!


This site is made by just two indie developers on a laptop doing marketing, support and development! Read more about the story.

Become a Premium Member ($3/month or $30/year) and get exclusive features!

Become Premium

Don't want to be a Premium member but still want to support us?

Make a small donation by buying us coffee ($5) or help with server cost ($10)

Donate via Paypal

Or Donate anonymously using crypto!

Ethereum

0xfe58350B80634f60Fa6Dc149a72b4DFbc17D341E copy

Bitcoin

3ATGMxNzCUFzxpMCHL5sWSt4DVtS8UqXpi copy

Thank you for your support!

Follow Us on Twitter!

:(